• DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways 

      Vlachos, I. S.; Kostoulas, N.; Vergoulis, T.; Georgakilas, G.; Reczko, M.; Maragkakis, M.; Paraskevopoulou, M. D.; Prionidis, K.; Dalamagas, T.; Hatzigeorgiou, A. G. (2012)
      MicroRNAs (miRNAs) are key regulators of diverse biological processes and their functional analysis has been deemed central in many research pipelines. The new version of DIANA-miRPath web server was redesigned from the ...
    • DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association 

      Maragkakis, M.; Vergoulis, T.; Alexiou, P.; Reczko, M.; Plomaritou, K.; Gousis, M.; Kourtis, K.; Koziris, N.; Dalamagas, T.; Hatzigeorgiou, A. G. (2011)
      microRNAs (miRNAs) are small endogenous RNA molecules that are implicated in many biological processes through post-transcriptional regulation of gene expression. The DIANA-microT Web server provides a user-friendly interface ...
    • DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows 

      Paraskevopoulou, M. D.; Georgakilas, G.; Kostoulas, N.; Vlachos, I. S.; Vergoulis, T.; Reczko, M.; Filippidis, C.; Dalamagas, T.; Hatzigeorgiou, A. G. (2013)
      MicroRNAs (miRNAs) are small endogenous RNA molecules that regulate gene expression through mRNA degradation and/or translation repression, affecting many biological processes. DIANA-microT web server (http://www.microrn ...
    • DIANA-miRPath v3.0: deciphering microRNA function with experimental support 

      Vlachos, I. S.; Zagganas, K.; Paraskevopoulou, M. D.; Georgakilas, G.; Karagkouni, D.; Vergoulis, T.; Dalamagas, T.; Hatzigeorgiou, A. G. (2015)
      The functional characterization of miRNAs is still an open challenge. Here, we present DIANA-miRPath v3.0 (http://www.microrna.gr/miRPathv3) an online software suite dedicated to the assessment of miRNA regulatory roles ...
    • DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions 

      Vlachos, I. S.; Paraskevopoulou, M. D.; Karagkouni, D.; Georgakilas, G.; Vergoulis, T.; Kanellos, I.; Anastasopoulos, I. L.; Maniou, S.; Karathanou, K.; Kalfakakou, D.; Fevgas, A.; Dalamagas, T.; Hatzigeorgiou, A. G. (2015)
      microRNAs (miRNAs) are short non-coding RNA species, which act as potent gene expression regulators. Accurate identification of miRNA targets is crucial to understanding their function. Currently, hundreds of thousands of ...
    • mirPub: a database for searching microRNA publications 

      Vergoulis, T.; Kanellos, I.; Kostoulas, N.; Georgakilas, G.; Sellis, T.; Hatzigeorgiou, A.; Dalamagas, T. (2015)
      A Summary: Identifying, amongst millions of publications available in MEDLINE, those that are relevant to specific microRNAs (miRNAs) of interest based on keyword search faces major obstacles. References to miRNA names in ...
    • Publishing diachronic life science linked data 

      Gkirtzou, K.; Vergoulis, T.; Hatzigeorgiou, A.; Sellis, T.; Dalamagas, T. (2014)
      The Linked Data paradigm involves practices to publish, share, and connect data on the Web. Thus, it is a compelling approach for the dissemination and re-use of scientific data, realizing the vision of the so-called Linked ...